EnhancerDB
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  3. rs542802865[chr12:117038964]
Enhancers that have rs542802865[chr12:117038964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542802865[chr12:117038964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117037988 117039003 AR GTRD no Prostate (PC-3) 21577606
chr12 117038799 117039149 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577610
chr12 117038834 117039371 TCF7L2 GTRD no Colon (HCT116) 21577611
chr12 117038834 117039371 TCF7L2 GTRD no Colon (HCT116) 108061844
chr12 117038921 117040555 ZNF274 GTRD no Liver (HepG2) 108061845
chr12 117038921 117040555 ZNF274 GTRD no Liver (HepG2) 108061846
chr12 117038954 117038970 E2F2 JASPAR yes 124013639
chr12 117038956 117039362 ZNF274 GTRD no Bone Marrow (K562) 21577612
chr12 117038956 117039362 ZNF274 GTRD no Bone Marrow (K562) 108061847
Genes associated with rs542802865[chr12:117038964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More