EnhancerDB
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  3. rs542818420[chr12:122225154]
Enhancers that have rs542818420[chr12:122225154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr12 122225058 122225273 vista15190
VISTA
Transcript factors that have rs542818420[chr12:122225154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122223179 122225333 ZNF274 GTRD no Bone Marrow (K562) 21579348
chr12 122223179 122225333 ZNF274 GTRD no Bone Marrow (K562) 108065462
chr12 122223179 122225333 ZNF274 GTRD no Bone Marrow (K562) 108065463
chr12 122224033 122226251 ZNF274 GTRD no Bone Marrow (K562) 21579354
chr12 122224033 122226251 ZNF274 GTRD no Bone Marrow (K562) 108065469
chr12 122224033 122226251 ZNF274 GTRD no Bone Marrow (K562) 108065470
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 21579357
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065474
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065475
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065476
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065477
chr12 122224313 122227126 ZNF143 GTRD no Epithelial (MCF-7) 21579367
chr12 122224313 122227126 ZNF143 GTRD no Epithelial (MCF-7) 108065491
chr12 122224313 122227126 ZNF143 GTRD no Epithelial (MCF-7) 108065492
chr12 122224342 122225313 ZNF143 GTRD no Epithelial (MCF-7) 21579373
chr12 122224342 122225313 ZNF143 GTRD no Epithelial (MCF-7) 108065498
chr12 122224342 122225313 ZNF143 GTRD no Epithelial (MCF-7) 108065499
chr12 122224386 122227149 ZNF274 GTRD no Bone Marrow (K562) 21579383
chr12 122224386 122227149 ZNF274 GTRD no Bone Marrow (K562) 108065512
chr12 122224386 122227149 ZNF274 GTRD no Bone Marrow (K562) 108065513
chr12 122224468 122225333 ZNF143 GTRD no Epithelial (MCF-7) 21579391
chr12 122224468 122225333 ZNF143 GTRD no Epithelial (MCF-7) 108065526
chr12 122224468 122225333 ZNF143 GTRD no Epithelial (MCF-7) 108065527
chr12 122224488 122225339 ZNF143 GTRD no Epithelial (MCF-7) 21579392
chr12 122224488 122225339 ZNF143 GTRD no Epithelial (MCF-7) 108065530
chr12 122224555 122225192 ZNF143 GTRD no Epithelial (MCF-7) 21579393
chr12 122224555 122225192 ZNF143 GTRD no Epithelial (MCF-7) 108065531
chr12 122224651 122227051 ZNF274 GTRD no Bone Marrow (K562) 21579398
chr12 122224651 122227051 ZNF274 GTRD no Bone Marrow (K562) 108065537
chr12 122224686 122227416 TCF7L2 GTRD no Colon (HCT116) 21579399
chr12 122224686 122227416 TCF7L2 GTRD no Colon (HCT116) 108065538
chr12 122224717 122226948 ZNF143 GTRD no Epithelial (MCF-7) 21579400
chr12 122224717 122226948 ZNF143 GTRD no Epithelial (MCF-7) 108065539
chr12 122224787 122226364 ZNF143 GTRD no Epithelial (MCF-7) 21579402
chr12 122224787 122226364 ZNF143 GTRD no Epithelial (MCF-7) 108065541
chr12 122224854 122227160 ZNF274 GTRD no Bone Marrow (K562) 21579404
chr12 122224854 122227160 ZNF274 GTRD no Bone Marrow (K562) 108065543
chr12 122224897 122225475 TCF7L2 GTRD no Colon (HCT116) 21579405
chr12 122224897 122225475 TCF7L2 GTRD no Colon (HCT116) 108065544
chr12 122224938 122227531 ZNF274 GTRD no Blood (GM12878) 21579406
chr12 122224938 122227531 ZNF274 GTRD no Blood (GM12878) 108065545
chr12 122224938 122227531 ZNF274 GTRD no Blood (GM12878) 108065546
chr12 122224938 122227542 ZNF274 GTRD no Blood (GM12878) 21579407
chr12 122224938 122227542 ZNF274 GTRD no Blood (GM12878) 108065547
chr12 122224938 122227542 ZNF274 GTRD no Blood (GM12878) 108065548
chr12 122224945 122227312 TCF7L2 GTRD no Colon (HCT116) 21579408
chr12 122224945 122227312 TCF7L2 GTRD no Colon (HCT116) 108065549
chr12 122224957 122225418 ZNF143 GTRD no Epithelial (MCF-7) 21579409
chr12 122224957 122225418 ZNF143 GTRD no Epithelial (MCF-7) 108065550
chr12 122224967 122225483 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579410
chr12 122224967 122225483 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065551
chr12 122224970 122227102 TCF7L2 GTRD no Colon (HCT116) 21579411
chr12 122224970 122227102 TCF7L2 GTRD no Colon (HCT116) 108065552
chr12 122224980 122225368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579412
chr12 122224980 122225368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065553
chr12 122224983 122225447 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21579413
chr12 122224983 122225447 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108065554
chr12 122224997 122227062 TCF7L2 GTRD no Colon (HCT116) 21579414
chr12 122224997 122227062 TCF7L2 GTRD no Colon (HCT116) 108065555
chr12 122225000 122227105 TCF7L2 GTRD no Colon (HCT116) 21579415
chr12 122225000 122227105 TCF7L2 GTRD no Colon (HCT116) 108065556
chr12 122225005 122227205 ZBTB33 GTRD no Lung (A549) 108065557
chr12 122225013 122225477 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579416
chr12 122225013 122225477 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065558
chr12 122225020 122227027 ZNF274 GTRD no Bone Marrow (K562) 21579417
chr12 122225020 122227027 ZNF274 GTRD no Bone Marrow (K562) 108065559
chr12 122225021 122226598 ZNF274 GTRD no Blood (GM12878) 21579418
chr12 122225021 122226598 ZNF274 GTRD no Blood (GM12878) 108065560
chr12 122225067 122225391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579419
chr12 122225067 122225391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065561
chr12 122225091 122227154 ZNF274 GTRD no Blood (GM12878) 21579420
chr12 122225091 122227154 ZNF274 GTRD no Blood (GM12878) 108065562
chr12 122225100 122226395 ZBTB33 GTRD no Brain (SK-N-SH) 21579421
chr12 122225100 122226395 ZBTB33 GTRD no Brain (SK-N-SH) 108065563
chr12 122225109 122226826 ZNF274 GTRD no Blood (GM12878) 21579422
chr12 122225109 122226826 ZNF274 GTRD no Blood (GM12878) 108065564
chr12 122225115 122225202 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579423
chr12 122225115 122225202 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065565
chr12 122225121 122226800 ZBTB33 GTRD no Lung (A549) 108065566
chr12 122225135 122226380 ZBTB33 GTRD no Lung (A549) 108065567
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 21579424
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065568
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065569
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065570
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065571
chr12 122225146 122225161 TFAP2C JASPAR yes 82490915
chr12 122225146 122225161 TFAP2C JASPAR yes 124246445
chr12 122225151 122227127 ZBTB33 GTRD no Lung (A549) 108065572
chr12 122225154 122227403 ZNF143 GTRD no Epithelial (MCF-7) 21579425
chr12 122225154 122227403 ZNF143 GTRD no Epithelial (MCF-7) 108065573
Genes associated with rs542818420[chr12:122225154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More