EnhancerDB
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  3. rs542827273[chr6:15065974]
Enhancers that have rs542827273[chr6:15065974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 15056505 15069475 enh23062
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Adrenal Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs542827273[chr6:15065974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 15065962 15065976 POU1F1 JASPAR yes 100179169
chr6 15065963 15065976 POU3F3 JASPAR yes 100179170
chr6 15065967 15065978 CDX2 JASPAR yes 100179171
chr6 15065968 15065979 HOXA10 JASPAR yes 100179172
chr6 15065969 15065978 CDX1 JASPAR yes 100179173
chr6 15065969 15065979 HOXA13 JASPAR yes 100179174
chr6 15065969 15065979 HOXB13 JASPAR yes 100179175
chr6 15065969 15065979 HOXD13 JASPAR yes 100179176
chr6 15065973 15065979 TBP TRANSFAC yes 100179177
Genes associated with rs542827273[chr6:15065974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More