EnhancerDB
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  3. rs542858721[chr5:171539520]
Enhancers that have rs542858721[chr5:171539520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs542858721[chr5:171539520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171539503 171539522 CTCF JASPAR yes 67763671
chr5 171539520 171539530 SREBF2 JASPAR yes 67763672
Genes associated with rs542858721[chr5:171539520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More