EnhancerDB
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  3. rs542879313[chr16:88365954]
Enhancers that have rs542879313[chr16:88365954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr16 88365536 88366092 vista23490
VISTA
Transcript factors that have rs542879313[chr16:88365954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88364943 88366268 ZBTB33 GTRD no Lung (A549) 108221964
chr16 88365153 88366045 ZNF143 GTRD no Epithelial (MCF-7) 21736028
chr16 88365153 88366045 ZNF143 GTRD no Epithelial (MCF-7) 108221965
chr16 88365176 88366045 ZNF143 GTRD no Epithelial (MCF-7) 21736029
chr16 88365176 88366045 ZNF143 GTRD no Epithelial (MCF-7) 108221966
chr16 88365202 88366045 ZNF143 GTRD no Epithelial (MCF-7) 21736030
chr16 88365202 88366045 ZNF143 GTRD no Epithelial (MCF-7) 108221967
chr16 88365207 88366027 TCF7L2 GTRD no Colon (HCT116) 21736031
chr16 88365207 88366027 TCF7L2 GTRD no Colon (HCT116) 108221968
chr16 88365601 88366379 EP300 UCSC Txn Factor no Conserved 108221975
chr16 88365601 88366379 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221976
chr16 88365602 88366142 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221977
chr16 88365625 88366145 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221978
chr16 88365643 88365987 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736033
chr16 88365643 88365987 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221980
chr16 88365643 88366303 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736034
chr16 88365643 88366303 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221981
chr16 88365644 88366148 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736035
chr16 88365644 88366148 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221982
chr16 88365645 88365975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736036
chr16 88365645 88365975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221983
chr16 88365649 88366105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736037
chr16 88365649 88366105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221984
chr16 88365651 88366135 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221985
chr16 88365651 88366314 TCF12 UCSC Txn Factor no Conserved 108221986
chr16 88365651 88366314 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221987
chr16 88365657 88366121 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21736038
chr16 88365657 88366121 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108221988
chr16 88365671 88366155 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221989
chr16 88365671 88366321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736039
chr16 88365671 88366321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221990
chr16 88365676 88366140 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736040
chr16 88365676 88366140 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221991
chr16 88365679 88366063 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736041
chr16 88365679 88366063 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221992
chr16 88365680 88366025 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221993
chr16 88365680 88366245 FOSL2 UCSC Txn Factor no Conserved 108221994
chr16 88365698 88366274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736042
chr16 88365698 88366274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221995
chr16 88365705 88366009 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736043
chr16 88365705 88366009 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221996
chr16 88365705 88366061 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21736044
chr16 88365705 88366061 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108221997
chr16 88365705 88366129 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221998
chr16 88365707 88366027 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736045
chr16 88365707 88366027 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221999
chr16 88365714 88365970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736046
chr16 88365714 88365970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222000
chr16 88365720 88366096 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736048
chr16 88365720 88366096 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222002
chr16 88365726 88365996 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21736049
chr16 88365726 88365996 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108222003
chr16 88365732 88365992 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736050
chr16 88365732 88365992 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222004
chr16 88365751 88366007 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21736052
chr16 88365751 88366007 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108222007
chr16 88365757 88366153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736053
chr16 88365757 88366153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222008
chr16 88365760 88366136 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21736055
chr16 88365760 88366136 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108222010
chr16 88365773 88366029 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222011
chr16 88365773 88366047 CEBPB UCSC Txn Factor no Conserved 108222012
chr16 88365776 88366432 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222013
chr16 88365779 88366047 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736056
chr16 88365779 88366047 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222014
chr16 88365779 88366100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736057
chr16 88365779 88366100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222015
chr16 88365779 88366420 TFAP2C UCSC Txn Factor no Conserved 108222016
chr16 88365781 88366165 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222017
chr16 88365804 88366084 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222019
chr16 88365829 88366072 ZNF274 GTRD no Bone Marrow (K562) 21736059
chr16 88365829 88366072 ZNF274 GTRD no Bone Marrow (K562) 108222021
chr16 88365829 88366305 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736060
chr16 88365829 88366305 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222022
chr16 88365835 88366245 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222023
chr16 88365842 88366192 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222024
chr16 88365851 88366227 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736061
chr16 88365851 88366227 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222025
chr16 88365873 88366029 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736062
chr16 88365873 88366029 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222026
chr16 88365880 88366114 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736063
chr16 88365880 88366114 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222027
chr16 88365882 88366112 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222028
chr16 88365882 88366366 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222029
chr16 88365904 88366420 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736064
chr16 88365904 88366420 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222030
chr16 88365942 88365963 REST JASPAR yes 12279634
chr16 88365942 88365963 REST JASPAR yes 49417180
chr16 88365953 88365968 TFAP2A JASPAR yes 12279635
chr16 88365953 88365968 TFAP2A JASPAR yes 49417181
Genes associated with rs542879313[chr16:88365954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More