EnhancerDB
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  3. rs542880870[chr19:1894475]
Enhancers that have rs542880870[chr19:1894475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1893405 1900210 enh17845
Bone Marrow (K562) Liver (HepG2) Blood (T-cell) Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs542880870[chr19:1894475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1894472 1894486 ONECUT2 JASPAR yes 112036253
chr19 1894472 1894486 ONECUT3 JASPAR yes 112036254
chr19 1894472 1894487 FOXP1 JASPAR yes 112036255
chr19 1894473 1894488 FOXA1 JASPAR yes 112036256
chr19 1894474 1894485 FOXB1 JASPAR yes 112036257
chr19 1894474 1894485 FOXC1 JASPAR yes 112036258
chr19 1894474 1894486 FOXC2 JASPAR yes 112036259
chr19 1894475 1894487 FOXI1 JASPAR yes 112036260
Genes associated with rs542880870[chr19:1894475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More