EnhancerDB
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  3. rs542888185[chr1:172793384]
Enhancers that have rs542888185[chr1:172793384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172784470 172799215 enh732
Bone Marrow (K562) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs542888185[chr1:172793384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172793377 172793392 FOXP1 JASPAR yes 33154659
chr1 172793378 172793389 HOXA10 JASPAR yes 33154660
chr1 172793379 172793389 HOXD13 JASPAR yes 33154661
chr1 172793379 172793394 FOXP1 JASPAR yes 33154662
chr1 172793381 172793396 FOXP1 JASPAR yes 33154663
chr1 172793382 172793397 FOXP1 JASPAR yes 33154664
chr1 172793383 172793389 TBP TRANSFAC yes 33154665
chr1 172793383 172793398 FOXP1 JASPAR yes 33154666
chr1 172793383 172793404 IRF1 JASPAR yes 33154667
chr1 172793384 172793399 FOXP1 JASPAR yes 33154668
Genes associated with rs542888185[chr1:172793384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More