EnhancerDB
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  3. rs542902624[chr4:4477209]
Enhancers that have rs542902624[chr4:4477209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 4472125 4496609 enh7856
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs542902624[chr4:4477209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 4477188 4477209 IRF1 JASPAR yes 87946519
chr4 4477189 4477209 RREB1 JASPAR yes 87946521
chr4 4477193 4477214 IRF1 JASPAR yes 87946524
chr4 4477194 4477209 FOXP1 JASPAR yes 87946525
chr4 4477194 4477214 RREB1 JASPAR yes 87946526
chr4 4477194 4477215 IRF1 JASPAR yes 87946527
chr4 4477197 4477212 FOXP1 JASPAR yes 87946528
Genes associated with rs542902624[chr4:4477209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More