EnhancerDB
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  3. rs542909950[chr12:47605275]
Enhancers that have rs542909950[chr12:47605275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47604098 47625535 enh2315
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs542909950[chr12:47605275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47605271 47605286 FOXP1 JASPAR yes 120684006
chr12 47605272 47605287 FOXP1 JASPAR yes 120684007
chr12 47605272 47605293 IRF1 JASPAR yes 120684008
chr12 47605273 47605279 TBP TRANSFAC yes 120684009
chr12 47605273 47605288 FOXP1 JASPAR yes 120684010
chr12 47605274 47605289 FOXP1 JASPAR yes 120684011
Genes associated with rs542909950[chr12:47605275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More