EnhancerDB
  1. Home
  2. SNP
  3. rs542912380[chr16:375200]
Enhancers that have rs542912380[chr16:375200]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
chr16 374933 375274 vista21509
VISTA
Transcript factors that have rs542912380[chr16:375200]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 21683785
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170125
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170126
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 21683786
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 108170127
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 108170128
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 21683787
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 108170129
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 108170130
chr16 374583 375435 ZNF143 GTRD no Epithelial (MCF-7) 21683838
chr16 374583 375435 ZNF143 GTRD no Epithelial (MCF-7) 108170195
chr16 374583 375435 ZNF143 GTRD no Epithelial (MCF-7) 108170196
chr16 374751 375275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21683841
chr16 374751 375275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108170200
chr16 374751 375275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108170201
chr16 374838 375498 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170203
chr16 374838 375498 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170204
chr16 374859 375489 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170205
chr16 374859 375489 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170206
chr16 374861 375297 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170207
chr16 374861 375297 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170208
chr16 374899 375279 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170209
chr16 374905 375425 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170210
chr16 374926 375266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170211
chr16 374926 375341 ZNF274 GTRD no Liver (HepG2) 21683843
chr16 374926 375341 ZNF274 GTRD no Liver (HepG2) 108170212
chr16 374939 375284 ZNF274 GTRD no Liver (HepG2) 21683844
chr16 374939 375284 ZNF274 GTRD no Liver (HepG2) 108170213
chr16 374952 375319 RUNX3 UCSC Txn Factor no Conserved 108170214
chr16 374952 375319 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170215
chr16 374961 375265 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170216
chr16 374988 375398 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170217
chr16 374998 375318 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170218
chr16 375038 375345 ELF1 UCSC Txn Factor no Conserved 108170219
chr16 375038 375345 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170220
chr16 375042 375282 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170221
chr16 375047 375307 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170222
chr16 375110 375267 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21683845
chr16 375110 375267 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108170223
chr16 375143 375248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170224
chr16 375193 375206 ELF1 JASPAR yes 9104631
chr16 375193 375206 ELF1 JASPAR yes 49324649
chr16 375194 375204 ELK1 JASPAR yes 9104632
chr16 375194 375204 ELK1 JASPAR yes 49324650
chr16 375194 375206 EHF JASPAR yes 9104633
chr16 375194 375206 ELF1 JASPAR yes 9104634
chr16 375194 375206 ELF4 JASPAR yes 9104635
chr16 375194 375206 EHF JASPAR yes 49324651
chr16 375194 375206 ELF1 JASPAR yes 49324652
chr16 375194 375206 ELF4 JASPAR yes 49324653
chr16 375194 375207 ELF3 JASPAR yes 9104636
chr16 375194 375207 ELF3 JASPAR yes 49324654
chr16 375195 375206 ELF5 JASPAR yes 9104637
chr16 375195 375206 SPDEF JASPAR yes 9104638
chr16 375195 375206 ELF5 JASPAR yes 49324655
chr16 375195 375206 SPDEF JASPAR yes 49324656
chr16 375196 375205 ELK4 JASPAR yes 9104639
chr16 375196 375205 ELK4 JASPAR yes 49324657
chr16 375196 375206 GABPA JASPAR yes 9104640
chr16 375196 375206 GABPA JASPAR yes 49324658
chr16 375196 375207 ELK4 JASPAR yes 9104641
chr16 375196 375207 ELK4 JASPAR yes 49324659
chr16 375198 375204 ETS1 JASPAR yes 9104642
chr16 375198 375204 SPI1 JASPAR yes 9104643
chr16 375198 375204 ETS1 JASPAR yes 49324660
chr16 375198 375204 SPI1 JASPAR yes 49324661
Genes associated with rs542912380[chr16:375200], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More