EnhancerDB
  1. Home
  2. SNP
  3. rs542917540[chr2:235208400]
Enhancers that have rs542917540[chr2:235208400]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235207125 235220255 enh19338
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Lung (PC-9) Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs542917540[chr2:235208400]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235208398 235208411 SMAD2 JASPAR yes 81864233
Genes associated with rs542917540[chr2:235208400], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More