EnhancerDB
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  3. rs542929494[chr12:53351445]
Enhancers that have rs542929494[chr12:53351445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542929494[chr12:53351445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53351424 53352422 TCF7L2 GTRD no Colon (HCT116) 21548177
chr12 53351432 53351446 POU4F1 JASPAR yes 120965999
chr12 53351432 53351447 FOXP1 JASPAR yes 120966000
chr12 53351432 53351447 HNF1A JASPAR yes 120966001
chr12 53351433 53351445 FOXC2 JASPAR yes 120966002
chr12 53351433 53351447 ONECUT2 JASPAR yes 120966003
chr12 53351433 53351447 ONECUT3 JASPAR yes 120966004
chr12 53351434 53351445 FOXB1 JASPAR yes 120966005
chr12 53351434 53351445 FOXC1 JASPAR yes 120966006
chr12 53351434 53351445 PROP1 JASPAR yes 120966007
chr12 53351434 53351450 POU4F2 JASPAR yes 120966008
chr12 53351434 53351450 POU4F3 JASPAR yes 120966009
chr12 53351435 53351450 FOXA1 JASPAR yes 120966011
chr12 53351436 53351448 FOXI1 JASPAR yes 120966012
chr12 53351436 53351450 POU4F1 JASPAR yes 120966013
chr12 53351436 53351451 FOXP1 JASPAR yes 120966014
chr12 53351436 53351451 HNF1A JASPAR yes 120966015
chr12 53351437 53351449 FOXC2 JASPAR yes 120966016
chr12 53351437 53351451 ONECUT2 JASPAR yes 120966017
chr12 53351437 53351451 ONECUT3 JASPAR yes 120966018
chr12 53351438 53351449 FOXB1 JASPAR yes 120966019
chr12 53351438 53351449 FOXC1 JASPAR yes 120966020
chr12 53351438 53351449 PROP1 JASPAR yes 120966021
chr12 53351438 53351454 POU4F2 JASPAR yes 120966022
chr12 53351438 53351454 POU4F3 JASPAR yes 120966023
chr12 53351439 53351454 FOXA1 JASPAR yes 120966025
chr12 53351440 53351452 FOXI1 JASPAR yes 120966026
chr12 53351440 53351454 POU4F1 JASPAR yes 120966027
chr12 53351440 53351455 FOXP1 JASPAR yes 120966028
chr12 53351440 53351455 HNF1A JASPAR yes 120966029
chr12 53351441 53351453 FOXC2 JASPAR yes 120966030
chr12 53351441 53351455 ONECUT2 JASPAR yes 120966031
chr12 53351441 53351455 ONECUT3 JASPAR yes 120966032
chr12 53351442 53351453 FOXB1 JASPAR yes 120966033
chr12 53351442 53351453 FOXC1 JASPAR yes 120966034
chr12 53351442 53351453 PROP1 JASPAR yes 120966035
chr12 53351442 53351458 POU4F2 JASPAR yes 120966036
chr12 53351442 53351458 POU4F3 JASPAR yes 120966037
chr12 53351443 53351447 YY1 TRANSFAC yes 120966038
chr12 53351443 53351458 FOXA1 JASPAR yes 120966039
chr12 53351444 53351456 FOXI1 JASPAR yes 120966040
chr12 53351444 53351458 POU4F1 JASPAR yes 120966041
chr12 53351444 53351459 FOXP1 JASPAR yes 120966042
chr12 53351444 53351459 HNF1A JASPAR yes 120966043
chr12 53351445 53351457 FOXC2 JASPAR yes 120966044
chr12 53351445 53351459 FOXF2 JASPAR yes 120966045
chr12 53351445 53351459 ONECUT3 JASPAR yes 120966046
chr12 53351445 53351459 POU4F1 JASPAR yes 120966047
chr12 53351445 53351461 POU4F3 JASPAR yes 120966048
Genes associated with rs542929494[chr12:53351445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More