EnhancerDB
  1. Home
  2. SNP
  3. rs542936217[chr1:33400627]
Enhancers that have rs542936217[chr1:33400627]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33395720 33407455 enh214
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs542936217[chr1:33400627]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33400620 33400633 NFKB1 JASPAR yes 28014605
chr1 33400620 33400633 NFKB2 JASPAR yes 28014606
chr1 33400623 33400634 CEBPB JASPAR yes 28014607
chr1 33400626 33400638 YY1 JASPAR yes 28014608
Genes associated with rs542936217[chr1:33400627], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More