EnhancerDB
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  3. rs542954375[chr1:212925894]
Enhancers that have rs542954375[chr1:212925894]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212921265 212930417 enh914
Liver (HepG2) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs542954375[chr1:212925894]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212925636 212926042 TEF1 GTRD no Bone (Osteoblast) 107869355
chr1 212925886 212925900 TCF7L2 JASPAR yes 35150792
chr1 212925890 212925896 TCF1 TRANSFAC yes 35150793
chr1 212925892 212926482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379201
chr1 212925892 212926482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869356
Genes associated with rs542954375[chr1:212925894], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More