EnhancerDB
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  3. rs542954913[chr1:156632096]
Enhancers that have rs542954913[chr1:156632096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 156627761 156638505 enh12301
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Thyroid Embryonic Stem Cell Line (H1-hESC) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 156630249 156635284 vista106
VISTA
Transcript factors that have rs542954913[chr1:156632096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 156629513 156632320 POLR2A UCSC Txn Factor no Conserved 107686537
chr1 156629513 156632320 POLR2A UCSC Txn Factor no Conserved 107836931
chr1 156629513 156632320 POLR2A UCSC Txn Factor no Conserved 107836932
chr1 156629513 156632320 POLR2A UCSC Txn Factor no Conserved 107836933
chr1 156631648 156632372 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837174
chr1 156631648 156632372 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837175
chr1 156631787 156632948 ZNF143 GTRD no Epithelial (MCF-7) 107837177
chr1 156631787 156632948 ZNF143 GTRD no Epithelial (MCF-7) 107837178
chr1 156631828 156632192 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21342824
chr1 156631828 156632192 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107837179
chr1 156631870 156632310 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837180
chr1 156631870 156632310 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837181
chr1 156631935 156632285 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837182
chr1 156631935 156632285 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837183
chr1 156632031 156632235 SPI1 UCSC Txn Factor no Conserved 107837184
chr1 156632031 156632235 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837185
chr1 156632039 156632960 ZNF143 GTRD no Epithelial (MCF-7) 107837186
chr1 156632046 156632219 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21342825
chr1 156632046 156632219 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107837187
chr1 156632079 156632969 ZNF143 GTRD no Epithelial (MCF-7) 107837188
chr1 156632091 156632099 EHF JASPAR yes 32398693
chr1 156632091 156632099 EHF JASPAR yes 71149269
chr1 156632096 156632903 ZNF274 GTRD no Cervix (HeLa-S3) 21342826
chr1 156632096 156632903 ZNF274 GTRD no Cervix (HeLa-S3) 107837189
Genes associated with rs542954913[chr1:156632096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More