EnhancerDB
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  3. rs542965907[chr17:37909391]
Enhancers that have rs542965907[chr17:37909391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 37904025 37913915 enh4401
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs542965907[chr17:37909391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 37909382 37909392 GSC2 JASPAR yes 54172686
chr17 37909382 37909392 GSC JASPAR yes 54172687
chr17 37909383 37909392 PITX3 JASPAR yes 54172688
chr17 37909390 37909405 MEF2A JASPAR yes 54172689
chr17 37909391 37909406 MEF2C JASPAR yes 54172690
Genes associated with rs542965907[chr17:37909391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More