EnhancerDB
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  3. rs543021626[chr17:79015385]
Enhancers that have rs543021626[chr17:79015385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs543021626[chr17:79015385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79015368 79015388 RREB1 JASPAR yes 56300050
chr17 79015368 79015389 IRF1 JASPAR yes 56300051
chr17 79015369 79015390 IRF1 JASPAR yes 56300054
chr17 79015372 79015387 IRF9 JASPAR yes 56300055
chr17 79015373 79015385 IRF1 JASPAR yes 56300056
chr17 79015375 79015390 FOXP1 JASPAR yes 56300058
chr17 79015376 79015391 STAT2 JASPAR yes 56300059
chr17 79015378 79015390 IRF1 JASPAR yes 56300060
chr17 79015378 79015392 IRF7 JASPAR yes 56300061
chr17 79015380 79015386 TCF4 TRANSFAC yes 56300062
Genes associated with rs543021626[chr17:79015385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More