EnhancerDB
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  3. rs543025340[chr17:78431488]
Enhancers that have rs543025340[chr17:78431488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78418565 78432855 enh4627
Bone Marrow (K562) Prostate (RWPE1) Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Stomach
chr17 78431372 78431666 vista26326
VISTA
Transcript factors that have rs543025340[chr17:78431488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78430677 78432044 ZNF274 GTRD no Liver (HepG2) 108307058
chr17 78430970 78436172 ZBTB33 GTRD no Lung (A549) 108307059
chr17 78431040 78431910 ZNF274 GTRD no Blood (GM12878) 108307060
chr17 78431145 78431733 SOX2 GTRD no Neural Stem Cells (H9) 108307061
chr17 78431156 78431903 ZNF274 GTRD no Bone Marrow (K562) 21797042
chr17 78431156 78431903 ZNF274 GTRD no Bone Marrow (K562) 108307062
chr17 78431179 78431816 TCF7L2 GTRD no Colon (HCT116) 108307063
chr17 78431205 78431970 ZNF143 GTRD no Epithelial (MCF-7) 108307064
chr17 78431212 78432073 TCF7L2 GTRD no Colon (HCT116) 108307065
chr17 78431213 78432021 ZNF143 GTRD no Epithelial (MCF-7) 108307066
chr17 78431224 78434014 TCF7L2 GTRD no Colon (HCT116) 108307067
chr17 78431232 78432042 TCF7L2 GTRD no Colon (HCT116) 108307068
chr17 78431242 78432052 TCF7L2 GTRD no Colon (HCT116) 108307069
chr17 78431319 78431984 ZNF274 GTRD no Blood (GM12878) 108307070
chr17 78431323 78431719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797043
chr17 78431323 78431719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108307071
chr17 78431358 78431622 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797044
chr17 78431358 78431622 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108307072
chr17 78431363 78431733 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307073
chr17 78431385 78431665 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797045
chr17 78431385 78431665 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108307074
chr17 78431435 78431893 ZNF274 GTRD no Liver (HepG2) 108307075
chr17 78431454 78431820 ZNF274 GTRD no Liver (HepG2) 108307076
chr17 78431474 78431491 RARA JASPAR yes 21314653
chr17 78431474 78431491 RXRA JASPAR yes 21314654
chr17 78431474 78431491 RARA JASPAR yes 56247059
chr17 78431474 78431491 RXRA JASPAR yes 56247060
chr17 78431483 78431494 USF1 JASPAR yes 21314655
chr17 78431483 78431494 USF2 JASPAR yes 21314656
chr17 78431483 78431494 USF1 JASPAR yes 56247061
chr17 78431483 78431494 USF2 JASPAR yes 56247062
chr17 78431483 78431495 PKNOX2 JASPAR yes 21314657
chr17 78431483 78431495 PKNOX2 JASPAR yes 56247063
chr17 78431484 78431491 USF2 TRANSFAC yes 21314658
chr17 78431484 78431491 USF2 TRANSFAC yes 56247064
chr17 78431484 78431494 SREBF1 JASPAR yes 21314659
chr17 78431484 78431494 SREBF2 JASPAR yes 21314660
chr17 78431484 78431494 TFEC JASPAR yes 21314661
chr17 78431484 78431494 SREBF1 JASPAR yes 56247065
chr17 78431484 78431494 SREBF2 JASPAR yes 56247066
chr17 78431484 78431494 TFEC JASPAR yes 56247067
chr17 78431484 78431495 USF1 JASPAR yes 21314662
chr17 78431484 78431495 USF1 JASPAR yes 56247068
chr17 78431486 78431491 USF2 TRANSFAC yes 21314663
chr17 78431486 78431491 USF2 TRANSFAC yes 56247069
Genes associated with rs543025340[chr17:78431488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More