EnhancerDB
  1. Home
  2. SNP
  3. rs543040522[chr12:98819596]
Enhancers that have rs543040522[chr12:98819596]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 98808646 98820983 enh14923
Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs543040522[chr12:98819596]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 98819592 98819607 HNF1A JASPAR yes 123141418
chr12 98819594 98819606 HNF1B JASPAR yes 123141419
chr12 98819594 98819609 FOXA1 JASPAR yes 123141420
chr12 98819595 98819607 FOXI1 JASPAR yes 123141421
chr12 98819596 98819608 FOXC2 JASPAR yes 123141422
chr12 98819596 98819610 ONECUT3 JASPAR yes 123141423
Genes associated with rs543040522[chr12:98819596], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More