EnhancerDB
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  3. rs543042974[chr17:79959859]
Enhancers that have rs543042974[chr17:79959859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79955085 79966579 enh17449
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs543042974[chr17:79959859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79959844 79959865 IRF1 JASPAR yes 56345233
chr17 79959845 79959866 IRF1 JASPAR yes 56345234
chr17 79959846 79959867 IRF1 JASPAR yes 56345235
chr17 79959850 79959871 IRF1 JASPAR yes 56345237
chr17 79959851 79959866 FOXP1 JASPAR yes 56345238
chr17 79959851 79959872 IRF1 JASPAR yes 56345239
chr17 79959855 79959876 IRF1 JASPAR yes 56345240
chr17 79959856 79959871 FOXP1 JASPAR yes 56345241
chr17 79959856 79959877 IRF1 JASPAR yes 56345242
chr17 79959857 79959872 STAT2 JASPAR yes 56345243
chr17 79959858 79959873 FOXP1 JASPAR yes 56345244
Genes associated with rs543042974[chr17:79959859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More