EnhancerDB
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  3. rs543081561[chr16:88270338]
Enhancers that have rs543081561[chr16:88270338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs543081561[chr16:88270338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88270238 88270744 ZBTB33 GTRD no Brain (SK-N-SH) 21735571
chr16 88270319 88270338 PAX5 JASPAR yes 12269091
chr16 88270328 88270338 SP1 JASPAR yes 12269092
chr16 88270331 88270346 ZIC3 JASPAR yes 12269093
chr16 88270331 88270346 ZIC4 JASPAR yes 12269094
chr16 88270331 88270347 GLIS1 JASPAR yes 12269095
chr16 88270332 88270346 GLIS2 JASPAR yes 12269096
chr16 88270332 88270346 GLIS3 JASPAR yes 12269097
chr16 88270335 88270340 SP1 TRANSFAC yes 12269098
chr16 88270336 88270346 ZNF740 JASPAR yes 12269099
Genes associated with rs543081561[chr16:88270338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More