EnhancerDB
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  3. rs543089946[chr1:221898980]
Enhancers that have rs543089946[chr1:221898980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221879328 221909475 enh12696
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Heart
Transcript factors that have rs543089946[chr1:221898980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 221898974 221898985 ESRRA JASPAR yes 35562431
chr1 221898975 221898995 PPARG JASPAR yes 35562432
chr1 221898978 221898982 LFA1 TRANSFAC yes 35562433
Genes associated with rs543089946[chr1:221898980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More