EnhancerDB
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  3. rs543120066[chr19:4581104]
Enhancers that have rs543120066[chr19:4581104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs543120066[chr19:4581104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4579392 4582305 TCF7L2 GTRD no Colon (HCT116) 21841667
chr19 4580040 4582276 TCF7L2 GTRD no Colon (HCT116) 21841669
chr19 4580047 4582399 TCF7L2 GTRD no Colon (HCT116) 21841671
chr19 4580080 4582414 TCF7L2 GTRD no Colon (HCT116) 21841674
chr19 4580087 4582761 ZNF274 GTRD no Liver (HepG2) 21841675
chr19 4580094 4582297 TCF7L2 GTRD no Colon (HCT116) 21841676
chr19 4580142 4582551 TCF7L2 GTRD no Colon (HCT116) 21841678
chr19 4580152 4582320 TCF7L2 GTRD no Colon (HCT116) 21841680
chr19 4580164 4582596 ZNF274 GTRD no Liver (HepG2) 21841682
chr19 4580255 4581279 ZNF274 GTRD no Liver (HepG2) 21841688
chr19 4580266 4582605 ZNF274 GTRD no Liver (HepG2) 21841691
chr19 4580270 4582085 TCF7L2 GTRD no Colon (HCT116) 21841692
chr19 4580764 4582143 ZNF274 GTRD no Liver (HepG2) 21841706
chr19 4581027 4582055 TCF7L2 GTRD no Colon (HCT116) 21841707
chr19 4581085 4582212 TCF7L2 GTRD no Colon (HCT116) 21841708
chr19 4581092 4581104 ZBTB7B JASPAR yes 112175995
chr19 4581094 4581104 ZNF740 JASPAR yes 112175996
chr19 4581094 4581110 GLIS1 JASPAR yes 112175997
chr19 4581095 4581105 SP1 JASPAR yes 112175998
chr19 4581095 4581105 ZNF740 JASPAR yes 112175999
chr19 4581095 4581109 GLIS2 JASPAR yes 112176000
chr19 4581095 4581109 GLIS3 JASPAR yes 112176001
chr19 4581095 4581110 ZIC3 JASPAR yes 112176002
chr19 4581097 4581111 ZIC1 JASPAR yes 112176003
Genes associated with rs543120066[chr19:4581104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More