EnhancerDB
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  3. rs543161958[chr1:9852271]
Enhancers that have rs543161958[chr1:9852271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9840492 9854775 enh53
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs543161958[chr1:9852271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9852253 9852273 RREB1 JASPAR yes 26678952
chr1 9852256 9852276 RREB1 JASPAR yes 26678953
chr1 9852259 9852279 RREB1 JASPAR yes 26678954
chr1 9852267 9852282 FOXP1 JASPAR yes 26678955
Genes associated with rs543161958[chr1:9852271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More