EnhancerDB
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  3. rs543163623[chr1:40301666]
Enhancers that have rs543163623[chr1:40301666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs543163623[chr1:40301666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40301658 40301673 FOXP1 JASPAR yes 28295434
chr1 40301662 40301677 FOXP1 JASPAR yes 28295435
chr1 40301663 40301684 IRF1 JASPAR yes 28295436
chr1 40301664 40301670 TBP TRANSFAC yes 28295437
chr1 40301664 40301675 FOXC1 JASPAR yes 28295438
chr1 40301664 40301676 FOXC2 JASPAR yes 28295439
chr1 40301665 40301676 FOXP2 JASPAR yes 28295440
Genes associated with rs543163623[chr1:40301666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More