EnhancerDB
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  3. rs543190964[chr17:46571219]
Enhancers that have rs543190964[chr17:46571219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs543190964[chr17:46571219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46571209 46571219 RORA JASPAR yes 54589794
chr17 46571219 46571225 ZNF354C JASPAR yes 54589795
Genes associated with rs543190964[chr17:46571219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More