EnhancerDB
  1. Home
  2. SNP
  3. rs543193109[chr17:76959246]
Enhancers that have rs543193109[chr17:76959246]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs543193109[chr17:76959246]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76957587 76959333 TCF7L2 GTRD no Colon (HCT116) 21795544
chr17 76958345 76959443 TCF7L2 GTRD no Colon (HCT116) 21795552
chr17 76959234 76959246 HINFP JASPAR yes 56194271
chr17 76959238 76959246 SP1 TRANSFAC yes 56194272
chr17 76959244 76959254 SREBF1 JASPAR yes 56194273
chr17 76959246 76959263 ESR1 JASPAR yes 56194274
Genes associated with rs543193109[chr17:76959246], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More