EnhancerDB
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  3. rs543230539[chr1:236324746]
Enhancers that have rs543230539[chr1:236324746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236308485 236329355 enh1002
Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs543230539[chr1:236324746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236324736 236324749 EOMES JASPAR yes 36407918
chr1 236324738 236324748 TBR1 JASPAR yes 36407919
chr1 236324738 236324749 TBX20 JASPAR yes 36407920
chr1 236324738 236324749 TBX2 JASPAR yes 36407921
chr1 236324739 236324749 TBX21 JASPAR yes 36407922
chr1 236324740 236324748 MGA JASPAR yes 36407923
chr1 236324740 236324748 TBX15 JASPAR yes 36407924
chr1 236324740 236324748 TBX1 JASPAR yes 36407925
chr1 236324740 236324748 TBX4 JASPAR yes 36407926
chr1 236324740 236324748 TBX5 JASPAR yes 36407927
Genes associated with rs543230539[chr1:236324746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More