EnhancerDB
  1. Home
  2. SNP
  3. rs543240190[chr19:3376198]
Enhancers that have rs543240190[chr19:3376198]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543240190[chr19:3376198]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3376187 3376201 PLAG1 JASPAR yes 112125072
chr19 3376193 3376204 E2F1 JASPAR yes 112125073
chr19 3376194 3376199 SP1 TRANSFAC yes 112125074
chr19 3376194 3376205 E2F4 JASPAR yes 112125075
chr19 3376194 3376205 E2F6 JASPAR yes 112125076
chr19 3376195 3376200 SP1 TRANSFAC yes 112125077
Genes associated with rs543240190[chr19:3376198], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More