EnhancerDB
  1. Home
  2. SNP
  3. rs543257668[chr1:154819648]
Enhancers that have rs543257668[chr1:154819648]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs543257668[chr1:154819648]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154818968 154820822 AR GTRD no Prostate (PC-3) 107833403
chr1 154819109 154820408 ZNF274 GTRD no Bone Marrow (K562) 107833404
chr1 154819110 154820488 ZNF274 GTRD no Cervix (HeLa-S3) 107833405
chr1 154819256 154820326 ZNF143 GTRD no Epithelial (MCF-7) 107833406
chr1 154819270 154820431 ZBTB33 GTRD no Lung (A549) 107833407
chr1 154819282 154820798 ZNF274 GTRD no Blood (GM12878) 21340735
chr1 154819282 154820798 ZNF274 GTRD no Blood (GM12878) 107833408
chr1 154819319 154820310 ZNF143 GTRD no Epithelial (MCF-7) 107833409
chr1 154819358 154820424 ZNF143 GTRD no Epithelial (MCF-7) 107833410
chr1 154819383 154820547 ZNF143 GTRD no Epithelial (MCF-7) 107833411
chr1 154819408 154820990 ZNF274 GTRD no Blood (GM12878) 21340736
chr1 154819408 154820990 ZNF274 GTRD no Blood (GM12878) 107833412
chr1 154819437 154820382 ZBTB33 GTRD no Lung (A549) 107833413
chr1 154819439 154820464 ZNF143 GTRD no Epithelial (MCF-7) 107833414
chr1 154819442 154820433 ZNF143 GTRD no Epithelial (MCF-7) 107833415
chr1 154819495 154821089 ZNF274 GTRD no Blood (GM12878) 21340737
chr1 154819495 154821089 ZNF274 GTRD no Blood (GM12878) 107833416
chr1 154819579 154820354 ZNF274 GTRD no Cervix (HeLa-S3) 107833417
chr1 154819638 154819659 IRF1 JASPAR yes 32318230
Genes associated with rs543257668[chr1:154819648], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More