EnhancerDB
  1. Home
  2. SNP
  3. rs543290949[chr2:228366664]
Enhancers that have rs543290949[chr2:228366664]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228362445 228384435 enh19286
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs543290949[chr2:228366664]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228366660 228366670 FIGLA JASPAR yes 81529124
chr2 228366660 228366670 TCF3 JASPAR yes 81529125
chr2 228366661 228366670 SNAI2 JASPAR yes 81529126
chr2 228366662 228366667 USF2 TRANSFAC yes 81529127
Genes associated with rs543290949[chr2:228366664], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More