EnhancerDB
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  3. rs543389229[chr19:3371878]
Enhancers that have rs543389229[chr19:3371878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543389229[chr19:3371878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 21838839
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 108366114
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 108366115
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 21838841
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 108366118
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 108366119
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 21838845
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 108366123
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 108366124
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 21838846
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 108366125
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 108366126
chr19 3371857 3371878 ZNF263 JASPAR yes 112124292
chr19 3371859 3371880 IRF1 JASPAR yes 112124294
chr19 3371864 3371885 ZNF263 JASPAR yes 112124296
chr19 3371865 3371886 IRF1 JASPAR yes 112124297
chr19 3371867 3371882 PRDM1 JASPAR yes 112124298
chr19 3371867 3371888 ZNF263 JASPAR yes 112124299
chr19 3371868 3371889 ZNF263 JASPAR yes 112124300
chr19 3371871 3371892 ZNF263 JASPAR yes 112124301
chr19 3371872 3371893 ZNF263 JASPAR yes 112124302
chr19 3371875 3371896 ZNF263 JASPAR yes 112124303
chr19 3371876 3371897 ZNF263 JASPAR yes 112124304
Genes associated with rs543389229[chr19:3371878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More