EnhancerDB
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  3. rs543419490[chr2:235215852]
Enhancers that have rs543419490[chr2:235215852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235207125 235220255 enh19338
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Lung (PC-9) Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs543419490[chr2:235215852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235215846 235215867 IRF1 JASPAR yes 81865439
chr2 235215848 235215869 IRF1 JASPAR yes 81865440
chr2 235215849 235215870 IRF1 JASPAR yes 81865441
chr2 235215850 235215871 IRF1 JASPAR yes 81865442
chr2 235215851 235215866 FOXP1 JASPAR yes 81865443
chr2 235215851 235215872 IRF1 JASPAR yes 81865444
chr2 235215852 235215867 FOXP1 JASPAR yes 81865445
chr2 235215852 235215873 IRF1 JASPAR yes 81865446
Genes associated with rs543419490[chr2:235215852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More