EnhancerDB
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  3. rs543427656[chr1:169083542]
Enhancers that have rs543427656[chr1:169083542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169076205 169091718 enh12359
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs543427656[chr1:169083542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169083536 169083548 YY1 JASPAR yes 32983860
chr1 169083539 169083552 POU2F2 JASPAR yes 32983861
chr1 169083539 169083554 LEF1 JASPAR yes 32983862
chr1 169083541 169083545 YY1 TRANSFAC yes 32983863
Genes associated with rs543427656[chr1:169083542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More