EnhancerDB
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  3. rs543459949[chr1:112189054]
Enhancers that have rs543459949[chr1:112189054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112188465 112218375 enh567
Bone Marrow (K562) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Lung Stomach Peripheral Blood (MM.1S) Adrenal Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Heart
Transcript factors that have rs543459949[chr1:112189054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112189040 112189055 FOXP1 JASPAR yes 31536372
chr1 112189040 112189061 IRF1 JASPAR yes 31536373
chr1 112189041 112189056 FOXP1 JASPAR yes 31536375
chr1 112189041 112189062 IRF1 JASPAR yes 31536376
chr1 112189042 112189057 FOXP1 JASPAR yes 31536377
chr1 112189044 112189059 FOXP1 JASPAR yes 31536378
chr1 112189045 112189060 STAT2 JASPAR yes 31536379
chr1 112189046 112189061 FOXP1 JASPAR yes 31536380
chr1 112189046 112189067 IRF1 JASPAR yes 31536381
chr1 112189048 112189060 FOXC2 JASPAR yes 31536382
chr1 112189048 112189068 RREB1 JASPAR yes 31536383
chr1 112189049 112189060 FOXP2 JASPAR yes 31536384
chr1 112189050 112189065 STAT2 JASPAR yes 31536385
chr1 112189051 112189063 IRF1 JASPAR yes 31536386
chr1 112189051 112189066 FOXP1 JASPAR yes 31536387
chr1 112189051 112189072 IRF1 JASPAR yes 31536388
chr1 112189053 112189073 RREB1 JASPAR yes 31536389
Genes associated with rs543459949[chr1:112189054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More