EnhancerDB
  1. Home
  2. SNP
  3. rs543472221[chr17:78832971]
Enhancers that have rs543472221[chr17:78832971]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs543472221[chr17:78832971]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78832963 78832977 TLX1 JASPAR yes 56286279
chr17 78832964 78832978 TLX1 JASPAR yes 56286280
chr17 78832970 78832979 NFIX JASPAR yes 56286281
chr17 78832970 78832980 NFIA JASPAR yes 56286282
Genes associated with rs543472221[chr17:78832971], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More