EnhancerDB
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  3. rs543479221[chr1:202005789]
Enhancers that have rs543479221[chr1:202005789]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs543479221[chr1:202005789]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005273 202006678 ZNF143 GTRD no Epithelial (MCF-7) 21365534
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202005488 202006663 ZNF274 GTRD no Cervix (HeLa-S3) 21365536
chr1 202005522 202006664 ZNF143 GTRD no Epithelial (MCF-7) 21365537
chr1 202005723 202006444 ZNF143 GTRD no Epithelial (MCF-7) 21365538
chr1 202005749 202008651 ZNF274 GTRD no Bone Marrow (K562) 107857424
chr1 202005753 202006408 ZNF274 GTRD no Liver (HepG2) 21365539
chr1 202005756 202006422 ZNF274 GTRD no Cervix (HeLa-S3) 21365540
chr1 202005770 202006564 ZNF274 GTRD no Liver (HepG2) 21365541
Genes associated with rs543479221[chr1:202005789], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More