EnhancerDB
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  3. rs543491408[chr12:46553322]
Enhancers that have rs543491408[chr12:46553322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs543491408[chr12:46553322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46552769 46554541 TCF7L2 GTRD no Colon (HCT116) 21540723
chr12 46552835 46554033 ZNF274 GTRD no Cervix (HeLa-S3) 21540724
chr12 46552870 46554001 TCF7L2 GTRD no Colon (HCT116) 21540725
chr12 46552876 46554399 ZNF274 GTRD no Cervix (HeLa-S3) 21540726
chr12 46552912 46553836 ZNF274 GTRD no Cervix (HeLa-S3) 21540727
chr12 46552916 46554028 TCF7L2 GTRD no Colon (HCT116) 21540728
chr12 46552926 46554356 TCF7L2 GTRD no Colon (HCT116) 21540729
chr12 46552963 46553936 ZBTB33 GTRD no Lung (A549) 21540730
chr12 46552981 46553918 ZBTB33 GTRD no Lung (A549) 21540731
chr12 46553011 46553936 TCF7L2 GTRD no Colon (HCT116) 21540732
chr12 46553023 46553889 ZBTB33 GTRD no Lung (A549) 21540733
chr12 46553045 46553921 TCF7L2 GTRD no Colon (HCT116) 21540734
chr12 46553113 46553882 ZBTB33 GTRD no Lung (A549) 21540735
chr12 46553113 46553893 ZNF274 GTRD no Cervix (HeLa-S3) 21540736
chr12 46553114 46553980 ZNF274 GTRD no Cervix (HeLa-S3) 21540737
chr12 46553127 46554380 ZNF274 GTRD no Cervix (HeLa-S3) 21540738
chr12 46553150 46554196 ZNF274 GTRD no Cervix (HeLa-S3) 21540739
chr12 46553156 46553837 TCF7L2 GTRD no Colon (HCT116) 21540740
chr12 46553158 46554121 TCF7L2 GTRD no Colon (HCT116) 21540741
chr12 46553158 46554597 ZBTB33 GTRD no Brain (SK-N-SH) 21540742
chr12 46553160 46553759 TCF7L2 GTRD no Colon (HCT116) 21540743
chr12 46553169 46553711 ZBTB33 GTRD no Brain (SK-N-SH) 21540744
chr12 46553200 46558410 ZBTB33 GTRD no Brain (SK-N-SH) 21540745
chr12 46553204 46554795 ZBTB33 GTRD no Brain (SK-N-SH) 21540746
chr12 46553205 46554581 ZBTB33 GTRD no Brain (SK-N-SH) 21540747
chr12 46553219 46553976 ZNF274 GTRD no Cervix (HeLa-S3) 21540748
chr12 46553224 46553883 ZBTB33 GTRD no Brain (SK-N-SH) 21540749
chr12 46553231 46554636 ZNF274 GTRD no Cervix (HeLa-S3) 21540750
chr12 46553236 46553911 ZBTB33 GTRD no Brain (SK-N-SH) 21540751
chr12 46553237 46553853 ZNF274 GTRD no Cervix (HeLa-S3) 21540752
chr12 46553256 46553746 ZBTB33 GTRD no Lung (A549) 21540753
chr12 46553261 46553754 ZBTB33 GTRD no Lung (A549) 21540754
chr12 46553271 46553760 ZNF274 GTRD no Cervix (HeLa-S3) 21540755
chr12 46553280 46553701 ZBTB33 GTRD no Lung (A549) 21540756
chr12 46553283 46553738 ZBTB33 GTRD no Lung (A549) 21540757
chr12 46553312 46553333 IRF1 JASPAR yes 120599677
chr12 46553316 46553331 FOXP1 JASPAR yes 120599679
chr12 46553316 46553696 ZNF274 GTRD no Cervix (HeLa-S3) 21540758
chr12 46553317 46553332 FOXP1 JASPAR yes 120599680
chr12 46553318 46553333 FOXP1 JASPAR yes 120599681
chr12 46553319 46553334 FOXP1 JASPAR yes 120599682
chr12 46553319 46553340 IRF1 JASPAR yes 120599683
chr12 46553320 46553335 FOXP1 JASPAR yes 120599684
Genes associated with rs543491408[chr12:46553322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More