EnhancerDB
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  3. rs543496384[chr19:4976044]
Enhancers that have rs543496384[chr19:4976044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543496384[chr19:4976044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 21842893
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 108374027
chr19 4975924 4977363 AR GTRD no Prostate (PC-3) 21842894
chr19 4975924 4977363 AR GTRD no Prostate (PC-3) 108374028
chr19 4975979 4977015 ZNF143 GTRD no Epithelial (MCF-7) 21842895
chr19 4975979 4977015 ZNF143 GTRD no Epithelial (MCF-7) 108374029
chr19 4975995 4976964 ZNF143 GTRD no Epithelial (MCF-7) 21842896
chr19 4975995 4976964 ZNF143 GTRD no Epithelial (MCF-7) 108374030
chr19 4976031 4976044 NFKB1 JASPAR yes 112201189
chr19 4976036 4976047 USF1 JASPAR yes 112201191
chr19 4976036 4976047 USF2 JASPAR yes 112201192
chr19 4976037 4976047 SREBF2 JASPAR yes 112201193
chr19 4976039 4976044 USF2 TRANSFAC yes 112201194
chr19 4976042 4976055 NR2F1 JASPAR yes 112201195
chr19 4976043 4976051 CREB1 JASPAR yes 112201196
chr19 4976044 4976062 RARA JASPAR yes 112201197
Genes associated with rs543496384[chr19:4976044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More