EnhancerDB
  1. Home
  2. SNP
  3. rs543501249[chr16:5000579]
Enhancers that have rs543501249[chr16:5000579]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4988771 5002255 enh16521
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs543501249[chr16:5000579]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 5000574 5000584 SP1 JASPAR yes 9294387
chr16 5000577 5000582 SP1 TRANSFAC yes 9294388
Genes associated with rs543501249[chr16:5000579], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More