EnhancerDB
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  3. rs543522309[chr1:10012380]
Enhancers that have rs543522309[chr1:10012380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10008297 10013755 enh55
Bone Marrow (K562) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs543522309[chr1:10012380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10012361 10012382 IRF1 JASPAR yes 26693326
chr1 10012365 10012380 PRDM1 JASPAR yes 26693327
chr1 10012365 10012380 STAT2 JASPAR yes 26693328
chr1 10012369 10012385 SOX4 JASPAR yes 26693329
chr1 10012369 10012385 SOX8 JASPAR yes 26693330
chr1 10012370 10012385 SOX21 JASPAR yes 26693331
chr1 10012377 10012386 SOX9 JASPAR yes 26693332
chr1 10012379 10012388 SRY JASPAR yes 26693333
Genes associated with rs543522309[chr1:10012380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More