EnhancerDB
  1. Home
  2. SNP
  3. rs543524179[chr2:39319679]
Enhancers that have rs543524179[chr2:39319679]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs543524179[chr2:39319679]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39319670 39319684 SPIC JASPAR yes 73180662
chr2 39319677 39319685 GATA5 JASPAR yes 73180663
Genes associated with rs543524179[chr2:39319679], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More