EnhancerDB
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  3. rs543554506[chr17:79376209]
Enhancers that have rs543554506[chr17:79376209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543554506[chr17:79376209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79375397 79376351 TCF7L2 GTRD no Colon (HCT116) 21797937
chr17 79375397 79376351 TCF7L2 GTRD no Colon (HCT116) 108309555
chr17 79376197 79376212 LEF1 JASPAR yes 56323468
Genes associated with rs543554506[chr17:79376209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More