EnhancerDB
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  3. rs543580837[chr2:39324700]
Enhancers that have rs543580837[chr2:39324700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs543580837[chr2:39324700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39324685 39324706 IRF1 JASPAR yes 73181521
chr2 39324688 39324703 FOXP1 JASPAR yes 73181522
chr2 39324688 39324709 IRF1 JASPAR yes 73181523
chr2 39324689 39324710 IRF1 JASPAR yes 73181524
chr2 39324690 39324705 FOXP1 JASPAR yes 73181525
chr2 39324690 39324711 IRF1 JASPAR yes 73181526
chr2 39324694 39324715 IRF1 JASPAR yes 73181527
chr2 39324695 39324710 FOXP1 JASPAR yes 73181528
chr2 39324695 39324716 IRF1 JASPAR yes 73181529
chr2 39324696 39324717 IRF1 JASPAR yes 73181530
chr2 39324697 39324712 FOXP1 JASPAR yes 73181531
chr2 39324699 39324714 FOXP1 JASPAR yes 73181532
chr2 39324700 39324715 FOXP1 JASPAR yes 73181533
Genes associated with rs543580837[chr2:39324700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More