EnhancerDB
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  3. rs543583140[chr16:1333498]
Enhancers that have rs543583140[chr16:1333498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543583140[chr16:1333498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1329860 1335538 TCF7L2 GTRD no Colon (HCT116) 21684409
chr16 1330900 1333590 ZNF274 GTRD no Cervix (HeLa-S3) 21684434
chr16 1331384 1334313 TCF7L2 GTRD no Colon (HCT116) 21684450
chr16 1331593 1335283 TCF7L2 GTRD no Colon (HCT116) 21684468
chr16 1331653 1335053 TCF7L2 GTRD no Colon (HCT116) 21684476
chr16 1331665 1335207 TCF7L2 GTRD no Colon (HCT116) 21684480
chr16 1331764 1335175 TCF7L2 GTRD no Colon (HCT116) 21684486
chr16 1332720 1333655 ZNF274 GTRD no Liver (HepG2) 21684494
chr16 1332787 1334935 TCF7L2 GTRD no Colon (HCT116) 21684495
chr16 1332791 1334859 TCF7L2 GTRD no Colon (HCT116) 21684496
chr16 1332832 1335182 TCF7L2 GTRD no Colon (HCT116) 21684497
chr16 1333003 1334219 TCF7L2 GTRD no Colon (HCT116) 21684498
chr16 1333005 1334337 ZNF143 GTRD no Epithelial (MCF-7) 21684499
chr16 1333076 1334912 TCF7L2 GTRD no Colon (HCT116) 21684500
chr16 1333162 1333879 TCF7L2 GTRD no Colon (HCT116) 21684501
chr16 1333263 1334124 ZNF143 GTRD no Epithelial (MCF-7) 21684502
chr16 1333324 1333542 TCF7L2 GTRD no Colon (HCT116) 21684503
chr16 1333324 1333890 ZNF143 GTRD no Epithelial (MCF-7) 21684504
chr16 1333387 1333995 ZNF274 GTRD no Liver (HepG2) 21684505
chr16 1333420 1334256 ZNF274 GTRD no Liver (HepG2) 21684506
chr16 1333490 1333500 SP1 JASPAR yes 9147671
chr16 1333493 1333504 E2F4 JASPAR yes 9147672
chr16 1333495 1333504 SP1 TRANSFAC yes 9147673
chr16 1333496 1333502 SP1 TRANSFAC yes 9147674
chr16 1333496 1333506 SP1 JASPAR yes 9147675
chr16 1333497 1333504 SP1 TRANSFAC yes 9147676
chr16 1333498 1333503 SP1 TRANSFAC yes 9147677
chr16 1333498 1333504 SP1 TRANSFAC yes 9147678
Genes associated with rs543583140[chr16:1333498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More