EnhancerDB
  1. Home
  2. SNP
  3. rs543590743[chr12:53373586]
Enhancers that have rs543590743[chr12:53373586]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543590743[chr12:53373586]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53372616 53373854 TCF7L2 GTRD no Colon (HCT116) 21548858
chr12 53373510 53374485 ZBTB33 GTRD no Lung (A549) 21548863
chr12 53373543 53374171 ZNF143 GTRD no Epithelial (MCF-7) 21548864
chr12 53373546 53374490 ZNF274 GTRD no Cervix (HeLa-S3) 21548865
chr12 53373551 53373970 ZNF143 GTRD no Epithelial (MCF-7) 21548866
chr12 53373574 53373943 ZNF274 GTRD no Liver (HepG2) 21548867
chr12 53373581 53373596 MEF2C JASPAR yes 120969675
chr12 53373584 53373599 FOXP1 JASPAR yes 120969676
chr12 53373585 53373600 FOXP1 JASPAR yes 120969677
chr12 53373586 53373601 FOXP1 JASPAR yes 120969678
chr12 53373586 53373607 IRF1 JASPAR yes 120969679
Genes associated with rs543590743[chr12:53373586], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More