EnhancerDB
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  3. rs543629382[chr1:15741406]
Enhancers that have rs543629382[chr1:15741406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543629382[chr1:15741406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15741010 15743090 TCF7L2 GTRD no Colon (HCT116) 107802187
chr1 15741394 15741407 NFKB1 JASPAR yes 26983625
chr1 15741394 15741407 NFKB2 JASPAR yes 26983626
chr1 15741395 15741406 NFKB1 JASPAR yes 26983629
chr1 15741396 15741406 RELA JASPAR yes 26983630
chr1 15741403 15741416 SMAD2 JASPAR yes 26983631
Genes associated with rs543629382[chr1:15741406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More