EnhancerDB
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  3. rs543644060[chr16:69650849]
Enhancers that have rs543644060[chr16:69650849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69621505 69657015 enh4116
Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543644060[chr16:69650849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69650837 69650851 SPI1 JASPAR yes 11287638
chr16 69650837 69650858 IRF1 JASPAR yes 11287639
chr16 69650838 69650859 IRF1 JASPAR yes 11287640
chr16 69650839 69650860 IRF1 JASPAR yes 11287641
chr16 69650840 69650855 FOXP1 JASPAR yes 11287642
chr16 69650840 69650861 IRF1 JASPAR yes 11287643
chr16 69650841 69650862 IRF1 JASPAR yes 11287644
chr16 69650842 69650857 FOXP1 JASPAR yes 11287645
chr16 69650842 69650863 IRF1 JASPAR yes 11287646
chr16 69650843 69650858 FOXP1 JASPAR yes 11287647
chr16 69650843 69650864 IRF1 JASPAR yes 11287648
chr16 69650844 69650859 FOXP1 JASPAR yes 11287649
chr16 69650844 69650865 IRF1 JASPAR yes 11287650
chr16 69650845 69650860 FOXP1 JASPAR yes 11287651
chr16 69650845 69650866 IRF1 JASPAR yes 11287652
chr16 69650846 69650861 FOXP1 JASPAR yes 11287653
chr16 69650846 69650867 IRF1 JASPAR yes 11287654
chr16 69650847 69650862 FOXP1 JASPAR yes 11287655
chr16 69650848 69650863 FOXP1 JASPAR yes 11287656
chr16 69650849 69650864 FOXP1 JASPAR yes 11287657
Genes associated with rs543644060[chr16:69650849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More