EnhancerDB
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  3. rs543677540[chr17:80467225]
Enhancers that have rs543677540[chr17:80467225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs543677540[chr17:80467225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80466566 80469395 ZNF274 GTRD no Bone Marrow (K562) 21800720
chr17 80467219 80467230 E2F1 JASPAR yes 56369603
chr17 80467220 80467225 SP1 TRANSFAC yes 56369604
chr17 80467220 80467231 E2F4 JASPAR yes 56369605
chr17 80467220 80467231 E2F6 JASPAR yes 56369606
chr17 80467221 80467226 SP1 TRANSFAC yes 56369607
Genes associated with rs543677540[chr17:80467225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More