EnhancerDB
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  3. rs543779978[chr19:14470726]
Enhancers that have rs543779978[chr19:14470726]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543779978[chr19:14470726]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14469189 14471190 ZNF143 GTRD no Epithelial (MCF-7) 21853177
chr19 14469227 14470766 ZNF274 GTRD no Blood (GM12878) 21853179
chr19 14469344 14471051 TCF7L2 GTRD no Colon (HCT116) 21853182
chr19 14469344 14471051 TCF7L2 GTRD no Colon (HCT116) 21853183
chr19 14470002 14470780 ZNF143 GTRD no Epithelial (MCF-7) 21853184
chr19 14470045 14471183 ZNF274 GTRD no Bone Marrow (K562) 21853185
chr19 14470327 14470947 ZNF274 GTRD no Bone Marrow (K562) 21853186
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 21853187
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391247
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391248
chr19 14470355 14470847 TCF7L2 GTRD no Colon (HCT116) 21853188
chr19 14470393 14471067 TCF7L2 GTRD no Colon (HCT116) 21853189
chr19 14470715 14470729 PLAG1 JASPAR yes 112565324
chr19 14470721 14470733 ZBTB7A JASPAR yes 112565325
chr19 14470723 14470728 SP1 TRANSFAC yes 112565326
chr19 14470726 14470731 SP1 TRANSFAC yes 112565327
Genes associated with rs543779978[chr19:14470726], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More